1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.009G169000.1

Sobic.009G169000.1


Description : pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G169000.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AC197705.4_FG001 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.02 Orthogroups_2024-Update
LOC_Os05g39320 No alias thiamine pyrophosphate enzyme, C-terminal TPP binding... 0.03 Orthogroups_2024-Update
MA_12415g0010 No alias (p51851|pdc2_pea : 593.0) Pyruvate decarboxylase isozyme... 0.05 Orthogroups_2024-Update
MA_161133g0010 No alias (at4g33070 : 822.0) Thiamine pyrophosphate dependent... 0.03 Orthogroups_2024-Update
PSME_00022292-RA No alias (at4g33070 : 389.0) Thiamine pyrophosphate dependent... 0.08 Orthogroups_2024-Update
PSME_00029235-RA No alias (at4g33070 : 372.0) Thiamine pyrophosphate dependent... 0.02 Orthogroups_2024-Update
Solyc06g082130 No alias Pyruvate decarboxylase (AHRD V3.3 *** A0A068LJB0_HEVBR) 0.03 Orthogroups_2024-Update
Solyc09g005110 No alias Pyruvate decarboxylase (AHRD V3.3 *** Q8H9C6_SOLTU) 0.03 Orthogroups_2024-Update
Sopen10g028150 No alias Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 0.04 Orthogroups_2024-Update
evm.model.contig_479.1 No alias (at5g54960 : 534.0) pyruvate decarboxylase-2; pyruvate... 0.02 Orthogroups_2024-Update
evm.model.tig00020614.45 No alias (p51848|pdc2_orysa : 471.0) Pyruvate decarboxylase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0003824 catalytic activity IEA 16Dec
MF GO:0030976 thiamine pyrophosphate binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 48 214
IPR012000 Thiamin_PyroP_enz_cen_dom 245 361
IPR011766 TPP_enzyme-bd_C 455 580
No external refs found!