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  5. Sobic.009G178500.1

Sobic.009G178500.1


Description : arabinogalactan protein *(Xylogen)


Gene families : OG_42_0000300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G178500.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
At3g43720 No alias Non-specific lipid transfer protein GPI-anchored 2... 0.03 Orthogroups_2024-Update
Brara.E01987.1 No alias arabinogalactan protein *(Xylogen) 0.02 Orthogroups_2024-Update
GRMZM2G004466 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
MA_64802g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_8892965g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00013381-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s126_84V6 No alias lipid binding 0.02 Orthogroups_2024-Update
Pp1s239_57V6 No alias F16J14.16; protease inhibitor/seed storage/lipid... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 38 129
No external refs found!