1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.009G178600.1

Sobic.009G178600.1


Description : ARF-GTPase *(ARF1)


Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G178600.1
Cluster HCAA Clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
A4A49_56393 No alias adp-ribosylation factor 0.02 Orthogroups_2024-Update
At3g62290 No alias ADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5] 0.05 Orthogroups_2024-Update
Brara.D00063.1 No alias ARF-GTPase *(ARF1) 0.04 Orthogroups_2024-Update
Brara.G02969.1 No alias ARF-GTPase *(ARF1) 0.02 Orthogroups_2024-Update
Kfl00446_0020 kfl00446_0020_v1.... (p51823|arf2_orysa : 357.0) ADP-ribosylation factor 2 -... 0.02 Orthogroups_2024-Update
LOC_Os10g42940 No alias miro, putative, expressed 0.03 Orthogroups_2024-Update
MA_24477g0010 No alias (p51823|arf2_orysa : 363.0) ADP-ribosylation factor 2 -... 0.03 Orthogroups_2024-Update
Solyc01g008000 No alias ADP-ribosylation factor (AHRD V3.3 *** ARF_VIGUN) 0.03 Orthogroups_2024-Update
Solyc01g100860 No alias ADP-ribosylation factor (AHRD V3.3 *** ARF_VIGUN) 0.03 Orthogroups_2024-Update
Solyc01g100870 No alias ADP-ribosylation factor (AHRD V3.3 *** ARF_VIGUN) 0.02 Orthogroups_2024-Update
Sopen01g044360 No alias ADP-ribosylation factor family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!