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  5. Sobic.009G178900.1

Sobic.009G178900.1


Description : Unknown function


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G178900.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Brara.H02834.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Glyma.07G057300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G202500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G245000 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G032300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
MA_153387g0010 No alias (at5g65360 : 137.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_222556g0010 No alias (at5g65360 : 149.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_74555g0010 No alias (at5g65360 : 127.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00010790-RA No alias (at5g65360 : 186.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.005G072300 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Sopen00g011880 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033790 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen02g022390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 32 151
No external refs found!