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  5. Sobic.009G180100.1

Sobic.009G180100.1


Description : Unknown function


Gene families : OG_42_0002205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G180100.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Bradi1g25750 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Bradi3g23320 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
LOC_Os06g12440 No alias LTPL60 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
LOC_Os07g39640 No alias LTPL64 - Protease inhibitor/seed storage/LTP family... 0.03 Orthogroups_2024-Update
Seita.9G423700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 155 242
No external refs found!