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  5. Sobic.009G180800.1

Sobic.009G180800.1


Description : EC_5.4 intramolecular transferase & glutamate-1-semialdehyde-2,1-aminomutase *(GSA)


Gene families : OG_42_0006197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G180800.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Bradi3g41270 No alias glutamate-1-semialdehyde-2,1-aminomutase 0.03 Orthogroups_2024-Update
Brara.F02243.1 No alias EC_5.4 intramolecular transferase &... 0.03 Orthogroups_2024-Update
Brara.I00749.1 No alias EC_5.4 intramolecular transferase &... 0.03 Orthogroups_2024-Update
GRMZM2G116258 No alias glutamate-1-semialdehyde 2,1-aminomutase 2 0.03 Orthogroups_2024-Update
Glyma.04G002900 No alias glutamate-1-semialdehyde 2,1-aminomutase 2 0.03 Orthogroups_2024-Update
Pp1s15_292V6 No alias glutamate-1-semialdehyde- -aminomutase 0.03 Orthogroups_2024-Update
Seita.3G195200.1 No alias EC_5.4 intramolecular transferase &... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA 16Dec
MF GO:0030170 pyridoxal phosphate binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 82 442
No external refs found!