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  5. Sobic.009G180900.1

Sobic.009G180900.1


Description : Unknown function


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G180900.1
Cluster HCAA Clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
A4A49_34434 No alias putative disease resistance rpp13-like protein 1 0.04 Orthogroups_2024-Update
Bradi2g21360 No alias NB-ARC domain-containing disease resistance protein 0.09 Orthogroups_2024-Update
Bradi2g52840 No alias NB-ARC domain-containing disease resistance protein 0.07 Orthogroups_2024-Update
Bradi3g41863 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 Orthogroups_2024-Update
Bradi3g41910 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
GRMZM2G393282 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.01G035800 No alias NB-ARC domain-containing disease resistance protein 0.08 Orthogroups_2024-Update
Glyma.02G030700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.06G318566 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.09G020500 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.11G212800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.13G187900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.13G193300 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G000860.7 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G005180.17 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G087730.12 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G126380.4 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G078990.16 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G017940.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G017950.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G062680.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G026360.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g18000 No alias disease resistance protein RGA2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g63200 No alias powdery mildew resistance protein PM3b, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g31570 No alias disease resistance protein RGA4, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os05g41310 No alias disease resistance protein RGA2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g04060 No alias powdery mildew resistance protein PM3b, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G261300 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.003G055600 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.003G200800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.017G015300 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.017G128000 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.017G133600 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Seita.3G195000.1 No alias Unknown function 0.11 Orthogroups_2024-Update
Seita.3G402500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G232800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G233400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G220200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G071950.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G101100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G137500.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g021050 No alias NB-ARC domain 0.02 Orthogroups_2024-Update
Sopen11g028670 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 177 399
No external refs found!