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  5. Sobic.009G183400.1

Sobic.009G183400.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G183400.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
A4A49_28305 No alias glucan endo-1,3-beta-glucosidase, basic vacuolar isoform ggib50 0.02 Orthogroups_2024-Update
At5g20330 No alias Probable glucan endo-1,3-beta-glucosidase BG4... 0.03 Orthogroups_2024-Update
Bradi2g60490 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g60536 No alias beta-1,3-glucanase 2 0.03 Orthogroups_2024-Update
Brara.D00298.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.16G113200 No alias Glycosyl hydrolase superfamily protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G105400.3 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU3Hr1G105420.2 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os01g71340 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g71820 No alias glycosyl hydrolases family 17, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g41610 No alias glycosyl hydrolases family 17, putative, expressed 0.03 Orthogroups_2024-Update
MA_795943g0010 No alias (p49237|e13b_maize : 198.0) Glucan... 0.02 Orthogroups_2024-Update
Mp2g12240.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Orthogroups_2024-Update
Mp2g14720.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Orthogroups_2024-Update
Mp7g13180.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Orthogroups_2024-Update
PSME_00017374-RA No alias (p49237|e13b_maize : 292.0) Glucan... 0.05 Orthogroups_2024-Update
PSME_00017375-RA No alias (p23546|e13e_tobac : 273.0) Glucan... 0.04 Orthogroups_2024-Update
Potri.006G048100 No alias beta-1,3-glucanase 1 0.02 Orthogroups_2024-Update
Pp1s447_13V6 No alias beta- -glucanase 0.02 Orthogroups_2024-Update
Pp1s7_53V6 No alias T1P2.13; glycosyl hydrolase family 17 protein... 0.03 Orthogroups_2024-Update
Solyc01g059980 No alias Beta-1,3-glucanase (AHRD V3.3 *** G9G7S0_HEVBR) 0.04 Orthogroups_2024-Update
Solyc01g060020 No alias beta-1,3-glucanase TOMB13GLUB 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 25 339
No external refs found!