Sobic.009G192600.1

Description : aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase

Gene families : OG_42_0000627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.009G192600.1

Target	Alias	Description	ECC score	Gene Family Method
Brara.G00044.1	No alias	EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase	0.03	Orthogroups_2024-Update
GRMZM2G108514	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.03	Orthogroups_2024-Update
HORVU3Hr1G075040.1	No alias	aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase	0.02	Orthogroups_2024-Update
LOC_Os08g04540	No alias	decarboxylase, putative, expressed	0.02	Orthogroups_2024-Update
Potri.004G036200	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
Potri.016G114300	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.03	Orthogroups_2024-Update
Seita.3G183700.1	No alias	aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
Seita.5G332600.1	No alias	EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
Seita.8G209800.1	No alias	EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase	0.04	Orthogroups_2024-Update
Sobic.003G116500.1	No alias	aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase	0.02	Orthogroups_2024-Update
Solyc07g054280	No alias	Tyrosine decarboxylase (AHRD V3.3 *** Q000T5_ARICO)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	IEA	16Dec
BP	GO:0019752	carboxylic acid metabolic process	IEA	16Dec
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	16Dec
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004834	tryptophan synthase activity	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
CC	GO:0005811	lipid droplet	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006568	tryptophan metabolic process	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predicted GO
BP	GO:0009606	tropism	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010274	hydrotropism	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Predicted GO
CC	GO:0016459	myosin complex	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0042430	indole-containing compound metabolic process	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	103	484

External Links

No external refs found!

Sobic.009G192600.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation