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  5. Solyc03g097420

Solyc03g097420


Description : HVA22-like protein (AHRD V3.3 *** K4BJF9_SOLLC)


Gene families : OG_42_0000566 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000566_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g097420
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
A4A49_02313 No alias hva22-like protein c 0.02 Orthogroups_2024-Update
At5g62490 No alias HVA22-like protein b [Source:UniProtKB/Swiss-Prot;Acc:Q9SYX7] 0.04 Orthogroups_2024-Update
Bradi2g48770 No alias HVA22-like protein F 0.03 Orthogroups_2024-Update
Seita.1G319600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G237200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g007300 No alias HVA22-like protein (AHRD V3.3 *** K4BWQ6_SOLLC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 24 98
No external refs found!