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  5. Sobic.009G195000.2

Sobic.009G195000.2


Description : TCP-type transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G195000.2
Cluster HCAA Clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Brara.E03597.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Pp1s207_110V6 No alias F12M16.13; TCP family transcription factor 3 (TCP3)... 0.03 Orthogroups_2024-Update
Seita.5G322500.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G299700.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sopen08g015840 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 60 122
No external refs found!