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Description : Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At4g05050 | |
| Cluster | HCCA clusters: Cluster_106 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi2g34750 | No alias | Ribosomal protein S27a / Ubiquitin family protein | 0.03 | Orthogroups_2024-Update | |
| Bradi4g38540 | No alias | ubiquitin extension protein 1 | 0.03 | Orthogroups_2024-Update | |
| Brara.C01815.1 | No alias | component *(eL40) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Brara.I04302.1 | No alias | component *(eS31) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Cre01.g007051 | No alias | Ubiquitin supergroup;Ribosomal protein L40e | 0.02 | Orthogroups_2024-Update | |
| Cre06.g273600 | No alias | Ribosomal protein S27a / Ubiquitin family protein | 0.03 | Orthogroups_2024-Update | |
| Cre09.g396400 | No alias | related to ubiquitin 1 | 0.01 | Orthogroups_2024-Update | |
| Glyma.15G129800 | No alias | Ribosomal protein S27a / Ubiquitin family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G042100 | No alias | polyubiquitin 10 | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G023660.1 | No alias | component *(eS31) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G026200.5 | No alias | UBQ ubiquitin-fold protein | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G026260.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os05g06770 | No alias | 40S ribosomal protein S27a, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os10g12620 | No alias | protein kinase domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| Mp7g14690.1 | No alias | component RPS27a of SSU proteome | 0.03 | Orthogroups_2024-Update | |
| Mp8g00780.1 | No alias | component RPL40 of LSU proteome component | 0.02 | Orthogroups_2024-Update | |
| Potri.001G025300 | No alias | ubiquitin 6 | 0.03 | Orthogroups_2024-Update | |
| Potri.007G067500 | No alias | related to ubiquitin 1 | 0.03 | Orthogroups_2024-Update | |
| Potri.012G024300 | No alias | Ubiquitin supergroup;Ribosomal protein L40e | 0.03 | Orthogroups_2024-Update | |
| Pp1s129_28V6 | No alias | Putative polyubiquitin | 0.03 | Orthogroups_2024-Update | |
| Pp1s184_64V6 | No alias | ubiquitin extension protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s268_35V6 | No alias | ubiquitin fusion protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s284_11V6 | No alias | ubiquitin fusion protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s56_52V6 | No alias | ubiquitin extension protein | 0.04 | Orthogroups_2024-Update | |
| Seita.9G478400.1 | No alias | component *(eL40) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G152600.1 | No alias | component *(eS31) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G054800.1 | No alias | component *(eS31) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Solyc01g056940 | No alias | Ubiquitin | 0.03 | Orthogroups_2024-Update | |
| Solyc01g096290 | No alias | ubiquitin-ribosomal fusion protein | 0.03 | Orthogroups_2024-Update | |
| Solyc12g098940 | No alias | Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO) | 0.03 | Orthogroups_2024-Update | |
| Solyc12g099030 | No alias | Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO) | 0.03 | Orthogroups_2024-Update | |
| Sopen01g029970 | No alias | Ubiquitin family | 0.04 | Orthogroups_2024-Update | |
| Sopen08g031340 | No alias | Ubiquitin family | 0.03 | Orthogroups_2024-Update | |
| Sopen12g033690 | No alias | Ubiquitin family | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_2055.11 | No alias | (at3g52590 : 241.0) Ubiquitin extension protein;... | 0.01 | Orthogroups_2024-Update | |
| evm.model.contig_3445.1 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00000144.76 | No alias | (at2g35635 : 253.0) encodes a ubiquitin-like protein... | 0.01 | Orthogroups_2024-Update | |
| evm.model.tig00022075.50 | No alias | (at3g52590 : 236.0) Ubiquitin extension protein;... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004807 | triose-phosphate isomerase activity | IEP | Predicted GO |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| No external refs found! |