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  5. Sobic.009G199300.1

Sobic.009G199300.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000544 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G199300.1
Cluster HCAA Clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G192600 No alias LOB domain-containing protein 38 0.03 Orthogroups_2024-Update
HORVU2Hr1G066080.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
PSME_00031117-RA No alias (at1g67100 : 181.0) LOB domain-containing protein 40... 0.04 Orthogroups_2024-Update
PSME_00037373-RA No alias (at1g67100 : 192.0) LOB domain-containing protein 40... 0.04 Orthogroups_2024-Update
Potri.002G119400 No alias LOB domain-containing protein 38 0.03 Orthogroups_2024-Update
Potri.007G053600 No alias LOB domain-containing protein 38 0.03 Orthogroups_2024-Update
Pp1s41_47V6 No alias lob domain-containing 0.03 Orthogroups_2024-Update
Seita.3G120000.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 27 126
No external refs found!