Sobic.009G200500.1

Description : PHD-type transcription factor

Gene families : OG_42_0002398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002398_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.009G200500.1
Cluster	HCAA Clusters: Cluster_327

Target	Alias	Description	ECC score	Gene Family Method	Actions
HORVU1Hr1G076380.1	No alias	PHD-type transcription factor	0.02	Orthogroups_2024-Update
Kfl00030_0070	kfl00030_0070_v1....	(p48786\|prh_petcr : 150.0) Pathogenesis-related...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	233	288
IPR001356	Homeobox_dom	596	636

External Links

No external refs found!