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  5. Sobic.009G206500.1

Sobic.009G206500.1


Description : respiratory burst NADPH oxidase *(SGN4) & NADPH-oxidase *(Rboh)


Gene families : OG_42_0000215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G206500.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
At5g47910 No alias Respiratory burst oxidase homolog protein D... 0.03 Orthogroups_2024-Update
At5g60010 No alias Putative respiratory burst oxidase homolog protein H... 0.03 Orthogroups_2024-Update
Brara.B03414.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Brara.C01498.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
GRMZM2G037993 No alias respiratory burst oxidase homologue D 0.04 Orthogroups_2024-Update
GRMZM2G358619 No alias respiratory burst oxidase homologue D 0.03 Orthogroups_2024-Update
Glyma.07G130800 No alias ferric reductase-like transmembrane component family protein 0.04 Orthogroups_2024-Update
Glyma.17G078300 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
MA_10427209g0020 No alias (at1g64060 : 925.0) Interacts with AtrbohD gene to fine... 0.03 Orthogroups_2024-Update
MA_10429792g0020 No alias (at1g64060 : 456.0) Interacts with AtrbohD gene to fine... 0.03 Orthogroups_2024-Update
Potri.001G098300 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
Sobic.005G139700.2 No alias NADPH-oxidase *(Rboh) 0.04 Orthogroups_2024-Update
Solyc11g072800 No alias Respiratory burst oxidase-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
InterPro domains Description Start Stop
IPR013112 FAD-bd_8 632 746
IPR013130 Fe3_Rdtase_TM_dom 435 590
IPR013121 Fe_red_NAD-bd_6 753 939
IPR013623 NADPH_Ox 176 275
No external refs found!