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  5. Sobic.009G210900.1

Sobic.009G210900.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000342 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G210900.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
89756 No alias O-Glycosyl hydrolases family 17 protein 0.03 Orthogroups_2024-Update
GRMZM2G097207 No alias O-Glycosyl hydrolases family 17 protein 0.03 Orthogroups_2024-Update
LOC_Os05g45860 No alias glucan endo-1,3-beta-glucosidase precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G002100 No alias O-Glycosyl hydrolases family 17 protein 0.04 Orthogroups_2024-Update
Potri.016G002800 No alias O-Glycosyl hydrolases family 17 protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 31 350
IPR012946 X8 371 442
No external refs found!