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  5. At4g05160

At4g05160


Description : 4-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g05160
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
123905 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
181279 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.03 Orthogroups_2024-Update
A4A49_40482 No alias 4-coumarate--coa ligase 1 0.03 Orthogroups_2024-Update
Bradi5g04760 No alias acyl-CoA synthetase 5 0.02 Orthogroups_2024-Update
Glyma.14G223200 No alias OPC-8:0 CoA ligase1 0.03 Orthogroups_2024-Update
MA_14460g0010 No alias (at1g20510 : 613.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.05 Orthogroups_2024-Update
PSME_00010615-RA No alias (at1g20510 : 540.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
Pp1s12_59V6 No alias amp dependent 0.02 Orthogroups_2024-Update
Pp1s20_346V6 No alias 4-coumarate: ligase 0.03 Orthogroups_2024-Update
Seita.5G416900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G537100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G214900.1 No alias p-coumarate 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004817 cysteine-tRNA ligase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
CC GO:0030289 protein phosphatase 4 complex IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 455 530
IPR000873 AMP-dep_Synth/Lig 35 446
No external refs found!