Sobic.009G212500.1

Description : AP2-type transcription factor *(WRI/AIL) & RAM1-dependent transcription factor *(WRI5)

Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.009G212500.1
Cluster	HCAA Clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
A4A49_32573	No alias	ap2-like ethylene-responsive transcription factor	0.04	Orthogroups_2024-Update
At1g51190	No alias	AP2-like ethylene-responsive transcription factor PLT2...	0.03	Orthogroups_2024-Update
At5g60120	No alias	Target of early activation tagged (EAT) 2...	0.04	Orthogroups_2024-Update
Brara.B01045.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
Brara.B01213.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
GRMZM2G028151	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
GRMZM2G086573	No alias	AINTEGUMENTA-like 5	0.02	Orthogroups_2024-Update
Glyma.04G047900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.16G007400	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
HORVU1Hr1G056500.15	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Pp1s66_282V6	No alias	ap2 erebp transcription factor	0.03	Orthogroups_2024-Update
Seita.3G165200.1	No alias	AP2-type transcription factor *(WRI/AIL) &...	0.02	Orthogroups_2024-Update
Seita.7G308300.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Sopen02g015090	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen03g008400	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen11g005510	No alias	hypothetical protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004474	malate synthase activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006097	glyoxylate cycle	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
BP	GO:0009767	photosynthetic electron transport chain	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
MF	GO:0016168	chlorophyll binding	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
BP	GO:0019684	photosynthesis, light reaction	IEP	Predicted GO
BP	GO:0022900	electron transport chain	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
BP	GO:0046487	glyoxylate metabolic process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	188	239
IPR001471	AP2/ERF_dom	86	145

External Links

No external refs found!