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  5. Sobic.009G213500.1

Sobic.009G213500.1


Description : histone chaperone *(NAP)


Gene families : OG_42_0000956 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000956_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G213500.1
Cluster HCAA Clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
Bradi2g18330 No alias nucleosome assembly protein 1;2 0.03 Orthogroups_2024-Update
Glyma.17G053800 No alias nucleosome assembly protein 1;2 0.03 Orthogroups_2024-Update
Potri.006G148600 No alias nucleosome assembly protein 1;2 0.02 Orthogroups_2024-Update
Pp1s1_822V6 No alias nucleosome assembly protein i-like protein 0.04 Orthogroups_2024-Update
Seita.3G164300.1 No alias histone chaperone *(NAP) 0.05 Orthogroups_2024-Update
Solyc08g063000 No alias Nucleosome assembly protein 1-like 1 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
evm.model.contig_2149.14 No alias (at4g26110 : 133.0) Encodes a member of a small gene... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA 16Dec
BP GO:0006334 nucleosome assembly IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002164 NAP_family 59 312
No external refs found!