Sobic.009G216300.1

Description : EC_3.2 glycosylase

Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.009G216300.1
Cluster	HCAA Clusters: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method	Actions
A4A49_37155	No alias	polygalacturonase-2	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	16Dec
BP	GO:0005975	carbohydrate metabolic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
BP	GO:0006353	DNA-templated transcription, termination	IEP	Predicted GO
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predicted GO
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predicted GO
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	101	425

External Links

No external refs found!