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  5. Sobic.009G216800.1

Sobic.009G216800.1


Description : farnesyl diphosphate synthase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG_42_0002847 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002847_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G216800.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
173042 No alias farnesyl diphosphate synthase 1 0.04 Orthogroups_2024-Update
GRMZM2G147721 No alias farnesyl diphosphate synthase 1 0.04 Orthogroups_2024-Update
Sobic.003G270500.1 No alias farnesyl diphosphate synthase & EC_2.5 transferase... 0.03 Orthogroups_2024-Update
Sopen10g001780 No alias Polyprenyl synthetase 0.04 Orthogroups_2024-Update
evm.model.tig00000852.50 No alias (p49353|fpps_maize : 352.0) Farnesyl pyrophosphate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 44 307
No external refs found!