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  5. Sobic.009G224200.1

Sobic.009G224200.1


Description : Unknown function


Gene families : OG_42_0001139 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G224200.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
At1g18290 No alias DUF4228 domain protein [Source:UniProtKB/TrEMBL;Acc:Q9LE02] 0.03 Orthogroups_2024-Update
At5g17350 No alias Uncharacterized protein At5g17350... 0.03 Orthogroups_2024-Update
GRMZM2G323387 No alias Function unknown 0.06 Orthogroups_2024-Update
Glyma.20G009000 No alias Function unknown 0.03 Orthogroups_2024-Update
MA_21964g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_38919g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_6324950g0010 No alias (at3g03280 : 102.0) unknown protein; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
MA_9762162g0010 No alias (at3g03280 : 88.2) unknown protein; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
PSME_00055830-RA No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update
Seita.3G155000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G260800.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Solyc02g091180 No alias LOW QUALITY:DUF4228 domain protein (AHRD V3.3 *** G7IAV0_MEDTR) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 185
No external refs found!