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  5. At4g05330

At4g05330


Description : AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]


Gene families : OG_42_0000207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g05330
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Brara.B03001.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G02645.1 No alias abscisic acid receptor recruitment factor *(CAR) 0.03 Orthogroups_2024-Update
Brara.H01068.1 No alias class III ARF-GAP ARF-GTPase-activating protein 0.03 Orthogroups_2024-Update
LOC_Os06g40704 No alias stromal membrane-associated protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g07800 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_15689g0010 No alias (at1g73580 : 99.8) Calcium-dependent lipid-binding (CaLB... 0.03 Orthogroups_2024-Update
PSME_00050324-RA No alias (at1g73580 : 112.0) Calcium-dependent lipid-binding... 0.03 Orthogroups_2024-Update
Potri.012G047100 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Orthogroups_2024-Update
Seita.1G047800.1 No alias class III ARF-GAP ARF-GTPase-activating protein 0.03 Orthogroups_2024-Update
Seita.1G138300.1 No alias abscisic acid receptor recruitment factor *(CAR) 0.03 Orthogroups_2024-Update
Seita.1G300700.1 No alias class III ARF-GAP ARF-GTPase-activating protein 0.03 Orthogroups_2024-Update
Seita.2G001600.1 No alias abscisic acid receptor recruitment factor *(CAR) 0.02 Orthogroups_2024-Update
Solyc02g063360 No alias Calcium-dependent lipid-binding domain-containing... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
CC GO:0005885 Arp2/3 protein complex IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0007015 actin filament organization IEP Predicted GO
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predicted GO
BP GO:0010638 positive regulation of organelle organization IEP Predicted GO
CC GO:0015629 actin cytoskeleton IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030832 regulation of actin filament length IEP Predicted GO
BP GO:0030833 regulation of actin filament polymerization IEP Predicted GO
BP GO:0030838 positive regulation of actin filament polymerization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
BP GO:0031334 positive regulation of protein complex assembly IEP Predicted GO
BP GO:0032271 regulation of protein polymerization IEP Predicted GO
BP GO:0032273 positive regulation of protein polymerization IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predicted GO
BP GO:0032970 regulation of actin filament-based process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043254 regulation of protein complex assembly IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044089 positive regulation of cellular component biogenesis IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045010 actin nucleation IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051495 positive regulation of cytoskeleton organization IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
BP GO:0097435 supramolecular fiber organization IEP Predicted GO
BP GO:0110053 regulation of actin filament organization IEP Predicted GO
BP GO:1902903 regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 180 270
IPR001164 ArfGAP_dom 16 131
No external refs found!