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  5. Sobic.009G225700.1

Sobic.009G225700.1


Description : NADH-dependent glutamate synthase & EC_1.4 oxidoreductase acting on CH-NH2 group of donor


Gene families : OG_42_0001188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G225700.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
439142 No alias NADH-dependent glutamate synthase 1 0.02 Orthogroups_2024-Update
Bradi2g17192 No alias NADH-dependent glutamate synthase 1 0.06 Orthogroups_2024-Update
Brara.C01389.1 No alias NADH-dependent glutamate synthase & EC_1.4... 0.03 Orthogroups_2024-Update
Cre12.g514050 No alias glutamate synthase 1 0.01 Orthogroups_2024-Update
Kfl00237_0040 kfl00237_0040_v1.1 (at5g53460 : 2969.0) NADH-dependent glutamate synthase;... 0.03 Orthogroups_2024-Update
Pp1s79_140V6 No alias glutamate synthase 0.02 Orthogroups_2024-Update
Sopen03g023210 No alias Conserved region in glutamate synthase 0.02 Orthogroups_2024-Update
evm.model.tig00001085.6 No alias (p23225|gltb_maize : 300.0) Ferredoxin-dependent... 0.03 Orthogroups_2024-Update
evm.model.tig00001085.7 No alias (at5g04140 : 348.0) Encodes a gene whose sequence is... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006537 glutamate biosynthetic process IEA 16Dec
BP GO:0006807 nitrogen compound metabolic process IEA 16Dec
MF GO:0015930 glutamate synthase activity IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR028261 DPD_II 1726 1822
IPR006982 Glu_synth_centr_N 592 878
IPR017932 GATase_2_dom 118 545
IPR002932 Glu_synthdom 948 1315
IPR002489 Glu_synth_asu_C 1399 1584
IPR023753 FAD/NAD-binding_dom 1839 2163
No external refs found!