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  5. Sobic.009G231300.1

Sobic.009G231300.1


Description : C2H2 subclass Di19 transcription factor


Gene families : OG_42_0000601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G231300.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
At1g02750 No alias Protein DEHYDRATION-INDUCED 19 homolog 2... 0.02 Orthogroups_2024-Update
Brara.E03257.1 No alias C2H2 subclass Di19 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G160273 No alias Drought-responsive family protein 0.04 Orthogroups_2024-Update
Glyma.03G217300 No alias Drought-responsive family protein 0.04 Orthogroups_2024-Update
Glyma.07G200800 No alias Drought-responsive family protein 0.03 Orthogroups_2024-Update
Glyma.13G175600 No alias Drought-responsive family protein 0.02 Orthogroups_2024-Update
Glyma.15G145400 No alias Drought-responsive family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G059310.3 No alias C2H2 subclass Di19 transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G087100.4 No alias C2H2 subclass Di19 transcription factor 0.04 Orthogroups_2024-Update
HORVU3Hr1G061690.1 No alias C2H2 subclass Di19 transcription factor 0.04 Orthogroups_2024-Update
LOC_Os01g73960 No alias drought induced 19 protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.013G011200 No alias Drought-responsive family protein 0.03 Orthogroups_2024-Update
Seita.3G147600.1 No alias C2H2 subclass Di19 transcription factor 0.05 Orthogroups_2024-Update
Solyc01g100140 No alias Dehydration-induced 19-like protein (AHRD V3.3 *-* E3T7S4_GOSHI) 0.03 Orthogroups_2024-Update
Solyc01g100160 No alias Dehydration-induced 19-like protein (AHRD V3.3 *** E3T7S4_GOSHI) 0.03 Orthogroups_2024-Update
Sopen01g043650 No alias Drought induced 19 protein (Di19), zinc-binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006361 transcription initiation from RNA polymerase I promoter IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:0140223 general transcription initiation factor activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008598 Di19_Zn_binding_dom 41 93
IPR027935 Di19_C 113 222
No external refs found!