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  5. Sobic.009G232100.1

Sobic.009G232100.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G232100.1
Cluster HCAA Clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Bradi2g00220 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Bradi2g16560 No alias FASCICLIN-like arabinogalactan protein 13 precursor 0.06 Orthogroups_2024-Update
Brara.C00098.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Glyma.12G207600 No alias FASCICLIN-like arabinoogalactan 9 0.02 Orthogroups_2024-Update
HORVU3Hr1G018810.2 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
LOC_Os01g06580 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00000648-RA No alias (at5g03170 : 112.0) FASCICLIN-like... 0.03 Orthogroups_2024-Update
Potri.013G120600 No alias FASCICLIN-like arabinogalactan 6 0.03 Orthogroups_2024-Update
Seita.5G263600.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc09g007650 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 42 177
No external refs found!