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  5. Sobic.009G232700.2

Sobic.009G232700.2


Description : small subunit of U2AF pre-RNA splicing auxiliary factor complex


Gene families : OG_42_0001056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G232700.2
Cluster HCAA Clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Brara.H02040.1 No alias small subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Orthogroups_2024-Update
GRMZM5G849788 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G073680.3 No alias small subunit of U2AF pre-RNA splicing auxiliary factor complex 0.03 Orthogroups_2024-Update
Sobic.004G178300.2 No alias splicing factor *(RGH3) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 150 173
IPR000571 Znf_CCCH 14 38
IPR000504 RRM_dom 83 139
No external refs found!