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  5. Sobic.009G238600.1

Sobic.009G238600.1


Description : clade A phosphatase


Gene families : OG_42_0000303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G238600.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
At1g07430 No alias Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3] 0.03 Orthogroups_2024-Update
Brara.A01600.1 No alias regulatory phosphatase component *(ABI1/ABI2) of... 0.02 Orthogroups_2024-Update
MA_18653g0010 No alias (at2g29380 : 286.0) highly ABA-induced PP2C gene 3... 0.03 Orthogroups_2024-Update
PSME_00002464-RA No alias (at3g11410 : 275.0) Encodes protein phosphatase 2C.... 0.04 Orthogroups_2024-Update
PSME_00034566-RA No alias (at4g26080 : 175.0) Involved in abscisic acid (ABA)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 85 378
No external refs found!