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At4g05490


Description : Putative F-box/LRR-repeat protein 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0U6]


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g05490
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Bradi3g15270 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G220200 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc08g013800 No alias F-box/LRR protein (AHRD V3.3 *** A0A072V906_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 27 73
No external refs found!