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  5. Sobic.009G251300.1

Sobic.009G251300.1


Description : Unknown function


Gene families : OG_42_0002555 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G251300.1
Cluster HCAA Clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G156765 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.03G262900 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU1Hr1G093430.8 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp6g14930.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.011G112300 No alias Function unknown 0.04 Orthogroups_2024-Update
Pp1s166_111V6 No alias numod3 motif family expressed 0.04 Orthogroups_2024-Update
Pp1s331_14V6 No alias numod3 motif family expressed 0.04 Orthogroups_2024-Update
Seita.3G125900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G420000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc03g123700 No alias muscle M-line assembly protein (AHRD V3.3 *** AT1G53800.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003611 NUMOD3 129 158
No external refs found!