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  5. Sobic.009G258100.1

Sobic.009G258100.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.009G258100.1
Cluster HCAA Clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Bradi1g12670 No alias lipases;hydrolases, acting on ester bonds 0.02 Orthogroups_2024-Update
Bradi4g00860 No alias lipases;hydrolases, acting on ester bonds 0.03 Orthogroups_2024-Update
Glyma.17G232235 No alias lipases;hydrolases, acting on ester bonds 0.04 Orthogroups_2024-Update
Kfl00319_0100 kfl00319_0100_v1.1 (at1g11960 : 547.0) ERD (early-responsive to dehydration... 0.02 Orthogroups_2024-Update
LOC_Os12g43720 No alias early-responsive to dehydration protein-related,... 0.03 Orthogroups_2024-Update
Mp7g04480.1 No alias calcium-permeable channel (OSCA) 0.02 Orthogroups_2024-Update
PSME_00028939-RA No alias (at3g21620 : 487.0) ERD (early-responsive to dehydration... 0.02 Orthogroups_2024-Update
Pp1s86_71V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Pp1s87_23V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Seita.3G120200.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Seita.3G403000.1 No alias calcium-permeable channel *(OSCA) 0.06 Orthogroups_2024-Update
Seita.9G306200.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Sopen02g025700 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR003864 RSN1_7TM 370 642
IPR027815 PHM7_cyt 197 359
IPR032880 Csc1_N 7 176
No external refs found!