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  5. Sobic.010G000800.2

Sobic.010G000800.2


Description : Unknown function


Gene families : OG_42_0001586 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G000800.2
Cluster HCAA Clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
A4A49_27150 No alias increased dna methylation 1 0.03 Orthogroups_2024-Update
A4A49_40344 No alias increased dna methylation 1 0.03 Orthogroups_2024-Update
Pp1s79_220V6 No alias dna binding 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032308 Jas 304 357
IPR032308 Jas 486 537
No external refs found!