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  5. Sobic.010G005900.1

Sobic.010G005900.1


Description : solute transporter *(UmamiT)


Gene families : OG_42_0002576 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002576_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G005900.1
Cluster HCAA Clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G063390 No alias nodulin MtN21 /EamA-like transporter family protein 0.03 Orthogroups_2024-Update
Glyma.06G138300 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 Orthogroups_2024-Update
Potri.012G007700 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000620 EamA_dom 46 183
IPR000620 EamA_dom 217 354
No external refs found!