Sobic.010G030200.1


Description : HD-ZIP I/II-type transcription factor


Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G030200.1
Cluster HCAA Clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
A4A49_16929 No alias homeobox-leucine zipper protein hat22 0.02 Orthogroups_2024-Update
At1g70920 No alias Homeobox-leucine zipper protein ATHB-X... 0.03 Orthogroups_2024-Update
LOC_Os04g46350 No alias homeobox associated leucine zipper, putative, expressed 0.02 Orthogroups_2024-Update
Seita.6G176400.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 127 181
IPR003106 Leu_zip_homeo 183 217
No external refs found!