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  5. Sobic.010G043600.1

Sobic.010G043600.1


Description : Unknown function


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G043600.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
418826 No alias IQ-domain 2 0.02 Orthogroups_2024-Update
GRMZM2G433557 No alias IQ-domain 5 0.03 Orthogroups_2024-Update
Glyma.07G204000 No alias IQ-domain 9 0.03 Orthogroups_2024-Update
HORVU7Hr1G023980.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g61720 No alias IQ calmodulin-binding motif domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g06160 No alias IQ calmodulin-binding motif domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp5g20460.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Pp1s161_50V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s7_145V6 No alias calmodulin binding 0.02 Orthogroups_2024-Update
Sobic.009G214500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g050050 No alias SUN-like protein 13 0.02 Orthogroups_2024-Update
Solyc11g071840 No alias SUN-like protein 31 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!