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  5. Sobic.010G080400.1

Sobic.010G080400.1


Description : Unknown function


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G080400.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
68470 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
73155 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
80895 No alias ethylene responsive element binding factor 2 0.03 Orthogroups_2024-Update
92334 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.03 Orthogroups_2024-Update
AC198403.3_FG001 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.03 Orthogroups_2024-Update
At1g36060 No alias Ethylene-responsive transcription factor ERF055... 0.02 Orthogroups_2024-Update
At2g25820 No alias Ethylene-responsive transcription factor ERF042... 0.03 Orthogroups_2024-Update
Brara.E00465.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.G00520.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.J02216.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Cre08.g364400 No alias DORNROSCHEN-like 0.02 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G173771 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
GRMZM2G376255 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM5G837876 No alias ethylene-responsive element binding factor 15 0.03 Orthogroups_2024-Update
Glyma.02G016100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G072000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G304300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G079100 No alias ethylene responsive element binding factor 2 0.03 Orthogroups_2024-Update
HORVU1Hr1G070410.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G082310.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G089930.5 No alias cutin and suberin biosynthesis transcription factor... 0.03 Orthogroups_2024-Update
LOC_Os02g13710 No alias ethylene-responsive transcription factor TINY, putative,... 0.02 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g08500 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g32620 No alias ethylene-responsive transcription factor ERF114,... 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g11460 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g11480 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10430769g0010 No alias (at5g25810 : 105.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_446533g0010 No alias (at4g16750 : 126.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.003G077700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G080600 No alias ethylene responsive element binding factor 6 0.02 Orthogroups_2024-Update
Potri.003G121200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s41_212V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G270800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G348100.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Seita.8G098100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g090560 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc11g011750 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen09g032850 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 32 80
No external refs found!