Sobic.010G083400.1


Description : Unknown function


Gene families : OG_42_0000013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G083400.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Bradi2g27300 No alias alpha/beta-Hydrolases superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G111421 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G323504 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G420786 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G250300 No alias carboxyesterase 13 0.03 Orthogroups_2024-Update
HORVU0Hr1G019680.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G022260.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G025380.7 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g15270 No alias gibberellin receptor GID1L2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g28230 No alias gibberellin receptor GID1L2, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g20050.1 No alias Gibberellin receptor GID1C OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00030838-RA No alias (at2g45600 : 256.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
Potri.009G104600 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G233300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G384800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G410900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.4G044100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G237700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G041800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G228200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G370000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G394900.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc05g051660 No alias Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen09g029090 No alias alpha/beta hydrolase fold 0.03 Orthogroups_2024-Update
evm.model.contig_448.7 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00001339.9 No alias (at5g16080 : 94.7) carboxyesterase 17 (CXE17); FUNCTIONS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 78 311
No external refs found!