Sobic.010G086400.2


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G086400.2
Cluster HCAA Clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
87949 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_22293 No alias ring-h2 finger protein atl13 0.05 Orthogroups_2024-Update
Bradi1g46750 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00287.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B02006.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.H00318.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.H02311.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I00473.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.06G310600 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
Glyma.11G087600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G003000.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g43120 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s38_53V6 No alias ring-h2 finger protein 0.03 Orthogroups_2024-Update
Seita.2G302400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Solyc05g055140 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.03 Orthogroups_2024-Update
Solyc11g006450 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 237 280
No external refs found!