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  5. Sobic.010G091400.1

Sobic.010G091400.1


Description : Unknown function


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G091400.1
Cluster HCAA Clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AC190628.4_FG007 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Bradi3g59247 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Kfl00055_0110 kfl00055_0110_v1.1 (at4g02480 : 607.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Seita.4G096600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen06g035910 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 715 845
No external refs found!