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  5. Sobic.010G091700.1

Sobic.010G091700.1


Description : bHLH-type transcription factor


Gene families : OG_42_0001251 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001251_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G091700.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
At5g15160 No alias Transcription factor PRE2... 0.02 Orthogroups_2024-Update
Solyc05g007210 No alias BHLH transcription factor (AHRD V3.3 *** C6TBH0_SOYBN) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 14 54
No external refs found!