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  5. Sobic.010G095100.1

Sobic.010G095100.1


Description : auxin transporter *(PIN) & auxin efflux transporter *(PIN)


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G095100.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
119024 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
A4A49_08912 No alias auxin efflux carrier component 5 0.02 Orthogroups_2024-Update
A4A49_35848 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi3g59520 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
GRMZM2G126260 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Seita.5G295300.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Solyc05g008060 No alias SlPIN4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005542 folic acid binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 601
No external refs found!