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  5. Sobic.010G104100.1

Sobic.010G104100.1


Description : transcriptional repressor *(NF-X1)


Gene families : OG_42_0001857 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001857_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G104100.1
Cluster HCAA Clusters: Cluster_69


Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000967 Znf_NFX1 332 349
IPR000967 Znf_NFX1 549 566
IPR000967 Znf_NFX1 454 471
IPR000967 Znf_NFX1 396 413
IPR000967 Znf_NFX1 510 521
IPR000967 Znf_NFX1 659 674
IPR000967 Znf_NFX1 606 622
IPR000967 Znf_NFX1 279 294
IPR000967 Znf_NFX1 696 718
No external refs found!