1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G104300.1

Sobic.010G104300.1


Description : class-PX small heat-shock-responsive protein


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G104300.1
Cluster HCAA Clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
A4A49_06519 No alias 17.4 kda class iii heat shock protein 0.03 Orthogroups_2024-Update
Bradi2g05374 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
Bradi2g12990 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Brara.C00497.1 No alias class-C-II small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Brara.E01351.1 No alias class-C-I small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Brara.H00106.1 No alias class-C-III small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
GRMZM2G046382 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G083810 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
GRMZM2G098167 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G481605 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G106800 No alias HSP20-like chaperones superfamily protein 0.07 Orthogroups_2024-Update
Glyma.04G054400 No alias 17.6 kDa class II heat shock protein 0.08 Orthogroups_2024-Update
Glyma.06G054700 No alias 17.6 kDa class II heat shock protein 0.07 Orthogroups_2024-Update
Glyma.07G200200 No alias HSP20-like chaperones superfamily protein 0.07 Orthogroups_2024-Update
Glyma.08G068700 No alias HSP20-like chaperones superfamily protein 0.06 Orthogroups_2024-Update
Glyma.08G068800 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G176200 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Glyma.13G176300 No alias HSP20-like chaperones superfamily protein 0.06 Orthogroups_2024-Update
Glyma.13G176500 No alias HSP20-like chaperones superfamily protein 0.07 Orthogroups_2024-Update
Glyma.14G099900 No alias 17.6 kDa class II heat shock protein 0.08 Orthogroups_2024-Update
Glyma.14G100000 No alias 17.6 kDa class II heat shock protein 0.07 Orthogroups_2024-Update
Glyma.17G224900 No alias 17.6 kDa class II heat shock protein 0.08 Orthogroups_2024-Update
Glyma.19G011400 No alias HSP20-like chaperones superfamily protein 0.08 Orthogroups_2024-Update
Glyma.20G015900 No alias 17.6 kDa class II heat shock protein 0.07 Orthogroups_2024-Update
Glyma.20G078400 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G020390.1 No alias class-C-II small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G020520.6 No alias class-C-II small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G015130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00404_0080 kfl00404_0080_v1.1 (at1g53540 : 122.0) HSP20-like chaperones superfamily... 0.02 Orthogroups_2024-Update
LOC_Os01g04380 No alias hsp20/alpha crystallin family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g54140 No alias hsp20/alpha crystallin family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426614g0020 No alias (at5g59720 : 176.0) encodes a low molecular weight heat... 0.03 Orthogroups_2024-Update
MA_212053g0010 No alias (at5g59720 : 101.0) encodes a low molecular weight heat... 0.04 Orthogroups_2024-Update
MA_24774g0010 No alias (at5g59720 : 211.0) encodes a low molecular weight heat... 0.02 Orthogroups_2024-Update
Mp5g23140.1 No alias class-C-II small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
PSME_00005053-RA No alias (p19242|hsp21_pea : 166.0) 17.1 kDa class II heat shock... 0.07 Orthogroups_2024-Update
PSME_00005054-RA No alias (p19242|hsp21_pea : 161.0) 17.1 kDa class II heat shock... 0.05 Orthogroups_2024-Update
PSME_00006329-RA No alias (p19243|hsp11_pea : 150.0) 18.1 kDa class I heat shock... 0.03 Orthogroups_2024-Update
PSME_00006331-RA No alias (p19243|hsp11_pea : 164.0) 18.1 kDa class I heat shock... 0.04 Orthogroups_2024-Update
PSME_00006740-RA No alias (at3g51680 : 165.0) NAD(P)-binding Rossmann-fold... 0.05 Orthogroups_2024-Update
PSME_00016583-RA No alias (p19242|hsp21_pea : 135.0) 17.1 kDa class II heat shock... 0.05 Orthogroups_2024-Update
PSME_00016584-RA No alias (p19242|hsp21_pea : 152.0) 17.1 kDa class II heat shock... 0.07 Orthogroups_2024-Update
PSME_00016602-RA No alias (p19243|hsp11_pea : 161.0) 18.1 kDa class I heat shock... 0.03 Orthogroups_2024-Update
PSME_00021602-RA No alias (p19242|hsp21_pea : 160.0) 17.1 kDa class II heat shock... 0.05 Orthogroups_2024-Update
PSME_00023198-RA No alias (at5g59720 : 222.0) encodes a low molecular weight heat... 0.05 Orthogroups_2024-Update
PSME_00023200-RA No alias (at5g59720 : 194.0) encodes a low molecular weight heat... 0.04 Orthogroups_2024-Update
PSME_00040332-RA No alias (at5g59720 : 219.0) encodes a low molecular weight heat... 0.03 Orthogroups_2024-Update
PSME_00042165-RA No alias (p19244|hsp41_pea : 162.0) 22.7 kDa class IV heat shock... 0.03 Orthogroups_2024-Update
PSME_00051906-RA No alias (p19243|hsp11_pea : 161.0) 18.1 kDa class I heat shock... 0.04 Orthogroups_2024-Update
PSME_00053179-RA No alias (p27396|hsp11_dauca : 195.0) 17.8 kDa class I heat shock... 0.03 Orthogroups_2024-Update
PSME_00055686-RA No alias (p19243|hsp11_pea : 110.0) 18.1 kDa class I heat shock... 0.04 Orthogroups_2024-Update
PSME_00055729-RA No alias (at1g54050 : 131.0) HSP20-like chaperones superfamily... 0.03 Orthogroups_2024-Update
Potri.009G039200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G049800 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G147900 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Pp1s372_62V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.06 Orthogroups_2024-Update
Pp1s85_11V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.07 Orthogroups_2024-Update
Pp1s8_244V6 No alias F12M12.200; 17.4 kDa class I heat shock protein... 0.02 Orthogroups_2024-Update
Pp1s8_86V6 No alias 17.4 kDa class I heat shock protein (HSP 17.4)... 0.02 Orthogroups_2024-Update
Seita.5G092800.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.003G082200.1 No alias class-C-I small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
Sobic.004G026300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g062450 No alias Heat-shock protein, putative (AHRD V3.3 *** B9RQT7_RICCO) 0.03 Orthogroups_2024-Update
Sopen09g007990 No alias Hsp20/alpha crystallin family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 35 145
No external refs found!