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  5. Sobic.010G106601.1

Sobic.010G106601.1


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G106601.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
A4A49_00094 No alias transcription factor myb108 0.04 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.02 Orthogroups_2024-Update
A4A49_31927 No alias transcription repressor myb4 0.04 Orthogroups_2024-Update
At1g74650 No alias At1g74650 [Source:UniProtKB/TrEMBL;Acc:Q9CA52] 0.03 Orthogroups_2024-Update
At3g61250 No alias Transcription factor MYB41... 0.04 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.03 Orthogroups_2024-Update
Bradi2g44770 No alias myb domain protein 21 0.03 Orthogroups_2024-Update
Brara.B01779.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.C02944.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Brara.I00299.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Cre02.g108350 No alias myb domain protein 1 0.01 Orthogroups_2024-Update
GRMZM2G001223 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
GRMZM2G070849 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G124715 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
GRMZM2G139688 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
GRMZM2G162434 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
GRMZM2G325907 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.02G110200 No alias myb domain protein 16 0.02 Orthogroups_2024-Update
Glyma.05G061900 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Glyma.05G211200 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.06G300200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.07G073000 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.07G235900 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.04 Orthogroups_2024-Update
Glyma.10G236600 No alias myb domain protein 45 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.11G215800 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.05 Orthogroups_2024-Update
Glyma.15G259400 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Glyma.15G264000 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.16G073000 No alias myb domain protein 21 0.02 Orthogroups_2024-Update
Glyma.17G031600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.19G219000 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Glyma.19G224600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Glyma.20G117000 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
HORVU1Hr1G008810.3 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G041280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G084170.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G041300.2 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g04820 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g35390 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_101790g0010 No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_121533g0010 No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_137934g0010 No alias (at3g23250 : 215.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.02 Orthogroups_2024-Update
MA_246142g0010 No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_33964g0010 No alias (at5g16600 : 262.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
MA_37851g0010 No alias (at3g08500 : 182.0) Encodes a putative R2R3-type MYB... 0.04 Orthogroups_2024-Update
MA_66255g0010 No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
MA_8147g0020 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
MA_8206949g0010 No alias (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4... 0.03 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
MA_94467g0010 No alias (at3g13540 : 228.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.03 Orthogroups_2024-Update
PSME_00024743-RA No alias (at1g63910 : 232.0) member of MYB3R- and R2R3- type MYB-... 0.03 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00039195-RA No alias (at5g57620 : 239.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.05 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
Potri.001G036000 No alias myb domain protein 65 0.04 Orthogroups_2024-Update
Potri.001G224500 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.009G027300 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s211_139V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s257_83V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.05 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Seita.2G199800.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G200200.1 No alias MYB class-R2R3 transcription factor 0.05 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.06 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Seita.3G402900.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G286200.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G179600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.05 Orthogroups_2024-Update
Seita.9G074800.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.06 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G232800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G280000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G191800.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G115200.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.04 Orthogroups_2024-Update
Sobic.008G055700.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g057910 No alias R2R3MYB transcription factor 2 0.03 Orthogroups_2024-Update
Solyc02g067760 No alias R2R3MYB transcription factor 21 0.02 Orthogroups_2024-Update
Solyc05g051550 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRU0_SALMI) 0.03 Orthogroups_2024-Update
Solyc10g008700 No alias R2R3MYB transcription factor 49 0.04 Orthogroups_2024-Update
Sopen02g033980 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen04g006600 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g028000 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen07g002850 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.05 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 71 111
No external refs found!