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  5. Sobic.010G108600.1

Sobic.010G108600.1


Description : 3-ketoacyl-CoA synthase *(KCS)


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G108600.1
Cluster HCAA Clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Bradi1g72560 No alias 3-ketoacyl-CoA synthase 10 0.04 Orthogroups_2024-Update
GRMZM2G003501 No alias 3-ketoacyl-CoA synthase 5 0.03 Orthogroups_2024-Update
HORVU5Hr1G056870.5 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
LOC_Os06g14810 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.010G125300 No alias 3-ketoacyl-CoA synthase 6 0.02 Orthogroups_2024-Update
Potri.013G119600 No alias 3-ketoacyl-CoA synthase 19 0.03 Orthogroups_2024-Update
Pp1s8_88V6 No alias beta-ketoacyl- synthase 0.02 Orthogroups_2024-Update
Seita.3G103400.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
Seita.9G285300.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 348 429
IPR013601 FAE1_typ3_polyketide_synth 45 330
No external refs found!