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  5. At4g08920

At4g08920


Description : Cryptochrome-1 [Source:UniProtKB/Swiss-Prot;Acc:Q43125]


Gene families : OG_42_0001675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g08920
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
92414 No alias cryptochrome 2 0.04 Orthogroups_2024-Update
Brara.I02459.1 No alias cryptochrome photoreceptor *(CRY) 0.06 Orthogroups_2024-Update
Glyma.13G089200 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
LOC_Os02g36380 No alias FAD binding domain of DNA photolyase domain containing... 0.03 Orthogroups_2024-Update
Mp2g17590.1 No alias cryptochrome photoreceptor (CRY) 0.03 Orthogroups_2024-Update
Seita.7G119400.1 No alias cryptochrome photoreceptor *(CRY) 0.02 Orthogroups_2024-Update
Solyc04g074180 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
Sopen04g029360 No alias FAD binding domain of DNA photolyase 0.03 Orthogroups_2024-Update
evm.model.contig_3749.1 No alias (at4g08920 : 292.0) Encodes CRY1, a flavin-type... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR020978 Cryptochrome_C 519 629
IPR005101 Cryptochr/Photolyase_FAD-bd 290 488
IPR006050 DNA_photolyase_N 14 170
No external refs found!