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  5. Sobic.010G123500.1

Sobic.010G123500.1


Description : BBX class-II transcription factor


Gene families : OG_42_0001800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G123500.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
At3g07650 No alias AT3G07650 protein [Source:UniProtKB/TrEMBL;Acc:A1A6H1] 0.04 Orthogroups_2024-Update
GRMZM2G013398 No alias CONSTANS-like 9 0.03 Orthogroups_2024-Update
GRMZM2G042198 No alias CONSTANS-like 9 0.03 Orthogroups_2024-Update
Glyma.02G223700 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
Glyma.20G060400 No alias CONSTANS-like 9 0.03 Orthogroups_2024-Update
LOC_Os02g49230 No alias CCT/B-box zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g19444 No alias CCT/B-box zinc finger protein, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s36_238V6 No alias sll2 protein 0.02 Orthogroups_2024-Update
Seita.1G301300.1 No alias BBX class-II transcription factor 0.06 Orthogroups_2024-Update
Seita.2G175000.1 No alias BBX class-II transcription factor 0.05 Orthogroups_2024-Update
Sopen05g017100 No alias CCT motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 354 396
No external refs found!