Sobic.010G130300.1

Description : endo-beta-1,4-mannanase

Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.010G130300.1
Cluster	HCAA Clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method	Actions
A4A49_13049	No alias	mannan endo-1,4-beta-mannosidase 6	0.03	Orthogroups_2024-Update
PSME_00047131-RA	No alias	(at5g66460 : 457.0) Glycosyl hydrolase superfamily...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0071704	organic substance metabolic process	IEA	16Dec

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001547	Glyco_hydro_5	88	347

External Links

No external refs found!