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  5. Sobic.010G130800.1

Sobic.010G130800.1


Description : Unknown function


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G130800.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
At3g16910 No alias Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.03 Orthogroups_2024-Update
Glyma.14G208200 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
LOC_Os03g04120 No alias AMP-binding enzyme, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os09g38350 No alias AMP-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10436072g0030 No alias (at5g16370 : 653.0) acyl activating enzyme 5 (AAE5);... 0.02 Orthogroups_2024-Update
PSME_00040387-RA No alias (at3g16910 : 749.0) Encodes a peroxisomal protein with... 0.03 Orthogroups_2024-Update
PSME_00057252-RA No alias (at1g65880 : 600.0) Encodes a benzoate-CoA ligase.... 0.04 Orthogroups_2024-Update
Potri.004G082000 No alias benzoyloxyglucosinolate 1 0.02 Orthogroups_2024-Update
Potri.007G059300 No alias acyl activating enzyme 1 0.03 Orthogroups_2024-Update
Potri.T116500 No alias benzoyloxyglucosinolate 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 21 463
IPR025110 AMP-bd_C 472 548
No external refs found!