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  5. Sobic.010G136900.1

Sobic.010G136900.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G136900.1
Cluster HCAA Clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G137700 No alias ABC-2 type transporter family protein 0.01 Orthogroups_2024-Update
HORVU1Hr1G030200.1 No alias wax lipid exporter *(CER5) & subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sopen11g004890 No alias ABC-2 type transporter 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 429 640
IPR003439 ABC_transporter-like 129 280
No external refs found!